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Oxford Instruments
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Journal: STAR Protocols
Article Title: Protocol to study synapse density or volume—SynDOVE—in brain using confocal microscopy and Imaris three-dimensional surface rendering software
doi: 10.1016/j.xpro.2026.104465
Figure Lengend Snippet: Conversion of ND2 files to IMS files Double-click image to automatically convert files to.ims format for Imaris. ND2 files will have the white 3D box and right-pointing arrow icons in the lower left corner. IMS files will have the 3D box icon in the lower left corner.
Article Snippet: • Below is a table ( ) that summarizes the recommended minimum image acquisition parameters for puncta detection and surface segmentation during
Techniques: